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TBF. She didn't make it she realized the potential, and immediately was scared of it, to the point of destroying the sample. Honestly the bigger thing for them would be figuring out and worrying about where the hell a sample of alien nanotech that could do that even came from. Because it has to come from somewhere, and while Sophia decided not to use it that way, the original owners might.Never. If the confed knew she made a bio weapon that could kill a entire race they would never let her out of a birdcage again with everything she does carefully watched.
Mech bias and the Mother Doctrine reared its ugly head.The first power armor were spec force stealth sneak suits that also happened to give some protection from mech scale weapons. And for some damn fool reason never reconfigured into a line suit that would have vastly improved infantry performance and survivability. Proper power armor was created from underwater mining suits much later by the clans.
As for Sophia with what she has on hand why could she not research a 3 or 4 parsec drive and work up to a kf drive? A 3 or 4 drive could fit in their current ships and still be a vast improvement and strategic asset.